成果/Result
- Incorporating dictionaries into deep neural networks for the Chinese clinical named entity recognition被引量：94收藏
- 作者：Wang, Qi Zhou, Yangming Ruan, Tong Gao, Daqi Xia, Yuhang He, Ping
- 机构：East China Univ Sci & Technol;Shanghai Hosp
- 来源：JOURNAL OF BIOMEDICAL INFORMATICS 2019
- 关键词：Clinical named entity recognition Electronic health records Deep neural network Dictionary features
- ST-Unet: Swin Transformer boosted U-Net with Cross-Layer Feature Enhancement for medical image segmentation被引量：90收藏
- 作者：Zhang, Jing Qin, Qiuge Ye, Qi Ruan, Tong
- 机构：East China Univ Sci & Technol
- 来源：COMPUTERS IN BIOLOGY AND MEDICINE 2023
- 关键词：Medical image segmentation Swin Transformer ST-Unet Cross-layer feature enhancement
- MinosEval: Distinguishing Factoid and Non-Factoid for Tailored Open-Ended QA Evaluation with LLMs被引量：66收藏
- 作者：Fan, Yongqi Wang, Yating Wang, Guandong Zhai, Jie Liu, Jingping Ye, Qi Ruan, Tong
- 机构： School of Information Science and Engineering
- 来源：arXiv 2025
- 关键词：Question answering
- 医疗数据治理——构建高质量医疗大数据智能分析数据基础被引量：64收藏
- 作者：阮彤 邱加辉 张知行 叶琪
- 机构：华东理工大学计算机科学与技术系
- 来源：《大数据》 2019
- 关键词：医疗数据治理 数据可用性 元数据 主数据
- 摘要：以专病真实世界研究为背景,分析了医疗数据治理和数据可用性存在的各种问题。从医院数据治理出发,延伸到区域数据治理、专科联盟数据治理以及医疗标注数据与知识型数据的治理,总结了不同层次、不同层面数据治理的共性方法与个性方法。在...
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- Fine-tuning BERT for Joint Entity and Relation Extraction in Chinese Medical Text被引量：59收藏
- 作者：Xue, Kui Zhou, Yangming Ma, Zhiyuan Ruan, Tong Zhang, Huanhuan He, Ping
- 机构：East China Univ Sci & Technol;Shanghai Hosp Dev Ctr
- 来源：2019 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM) 2019
- 关键词：Named entity recognition Relation classification Joint model BERT language model Electronic health records
- MMpedia: A Large-Scale Multi-modal Knowledge Graph被引量：57收藏
- 作者：Wu, Yinan Wu, Xiaowei Li, Junwen Zhang, Yue Wang, Haofen Du, Wen He, Zhidong Liu, Jingping Ruan, Tong
- 机构： School of Information Science and Engineering; College of Design and Innovation; DS Information Technology
- 来源：Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
- 关键词：Computational linguistics - Graphic methods - HTTP - Image enhancement - Natural language processing systems - Search engines
- MedEureka: A Medical Domain Benchmark for Multi-Granularity and Multi-Data-Type Embedding-Based Retrieval被引量：57收藏
- 作者：Fan, Yongqi Wang, Nan Xue, Kui Liu, Jingping Ruan, Tong
- 机构： School of Information Science and Engineering; Intelligent Healthcare
- 来源：2025 Annual Conference of the Nations of the Americas Chapter of the Association for Computational Linguistics: Proceedings of the Conference Findings, NAACL 2025 2025
- 关键词：Benchmarking - Computational linguistics - Electronic health record - Information retrieval - Medical computing - Natural language processing systems - Statistical tests
- CoT-Planner: Chain-of-Thoughts as the Content Planner for Few-shot Table-to-Text Generation Reduces the Hallucinations from LLMs被引量：55收藏
- 作者：Lin, Yupian Bian, Yuang Yu, Guangya Xue, Dongge Lu, Wanpeng Liu, Jingping Ruan, Tong
- 机构： School of Information Science and Engineering
- 来源：Proceedings of the International Joint Conference on Neural Networks 2025
- KG-o1: Enhancing Multi-hop Question Answering in Large Language Models via Knowledge Graph Integration被引量：55收藏
- 作者：Wang, Nan Fan, Yongqi Zhu, Yansha Wang, ZongYu Cao, Xuezhi He, Xinyan Jiang, Haiyun Ruan, Tong Liu, Jingping
- 机构： School of Information Science and Engineering; Meituan; School of Automation and Perception
- 来源：arXiv 2025
- 关键词：Graph theory - Knowledge graph - Question answering
- An LLM-based Framework for Biomedical Terminology Normalization in Social Media via Multi-Agent Collaboration被引量：55收藏
- 作者：Fan, Yongqi Xue, Kui Li, Zelin Zhang, Xiaofan Ruan, Tong
- 机构： School of Information Science and Engineering; Intelligent Healthcare; Northwestern University; Shanghai Jiao Tong University
- 来源：Proceedings - International Conference on Computational Linguistics, COLING 2025
- 垂直知识图谱的构建与应用研究被引量：53收藏
- 作者：阮彤 王梦婕 王昊奋 胡芳槐
- 机构：华东理工大学信息学院;华东理工大学计算机科学与工程系;上海海翼知信息科技有限公司
- 来源：《知识管理论坛》 2016
- 关键词：知识获取 知识融合 语义搜索 辅助开方 关系发现
- 摘要：[目的/意义]近年来,知识图谱技术受到学术界和工业界的普遍关注。提出数据驱动的增量式知识图谱构建方法,为构建垂直知识图谱提供一种新思路。同时,通过3个用例研究提供垂直知识图谱的应用示范。[方法/过程]首先给出知识图谱的形...
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- CMQCIC-Bench: A Chinese Benchmark for Evaluating Large Language Models in Medical Quality Control Indicator Calculation被引量：50收藏
- 作者：Yu, Guangya Li, Yanhao Jiang, Zongying Jin, Yuxiong Dai, Li Lin, Yupian Hou, Ruihui Zhang, Weiyan Fan, Yongqi Ye, Qi Liu, Jingping Ruan, Tong
- 机构： School of Information Science and Engineering
- 来源：Proceedings of the Annual Meeting of the Association for Computational Linguistics 2025
- 关键词：Benchmarking - Electronic health record - Medical computing - Quality control
- Fast and accurate recognition of chinese clinical named entities with residual dilated convolutions被引量：46收藏
- 作者：Qiu, Jiahui Wang, Qi Zhou, Yangming Ruan, Tong Gao, Ju
- 机构： School of Information Science and Engineering; Shanghai Shuguang Hospital
- 来源：arXiv 2018
- 关键词：Benchmarking - Clinical research - Convolution - Natural language processing systems - Records management - Recurrent neural networks
- Chinese Clinical Named Entity Recognition Using Residual Dilated Convolutional Neural Network With Conditional Random Field被引量：42收藏
- 作者：Qiu, Jiahui Zhou, Yangming Wang, Qi Ruan, Tong Gao, Ju
- 机构：East China Univ Sci & Technol;Shanghai Shuguang Hosp
- 来源：IEEE TRANSACTIONS ON NANOBIOSCIENCE 2019
- 关键词：Electronic health records clinical named entity recognition residual dilated convolutional neural network conditional random field
- Automatic Severity Classification of Coronary Artery Disease via Recurrent Capsule Network被引量：42收藏
- 作者：Wang, Qi Qiu, Jiahui Zhou, Yangming Ruan, Tong Gao, Daqi Gao, Ju
- 机构： School of Information Science and Engineering; Shanghai Shuguang Hospital
- 来源：Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018 2018
- 关键词：Diseases - Natural language processing systems - Computer aided diagnosis - Heart
- MSDIAGNOSIS: A Benchmark for Evaluating Large Language Models in Multi-Step Clinical Diagnosis被引量：41收藏
- 作者：Hou, Ruihui Chen, Shencheng Fan, Yongqi Yu, Guangya Zhu, Lifeng Sun, Jing Liu, Jingping Ruan, Tong
- 机构： School of Information Science and Engineering; Ruijin Hospital
- 来源：arXiv 2024
- 关键词：Benchmarking
- Incorporating dictionaries into deep neural networks for the Chinese clinical named entity recognition被引量：39收藏
- 作者：Wang, Qi Xia, Yuhang Zhou, Yangming Ruan, Tong Gao, Daqi He, Ping
- 机构： Department of Computer Science and Engineering; Shanghai Hospital Development Center
- 来源：arXiv 2018
- 关键词：Benchmarking - Clinical research - Deep neural networks - Large dataset - Natural language processing systems - Records management
- Can Multimodal Large Language Models Understand Spatial Relations?被引量：35收藏
- 作者：Liu, Jingping Liu, Ziyan Cen, Zhedong Zhou, Yan Zou, Yinan Zhang, Weiyan Jiang, Haiyun Ruan, Tong
- 机构： School of Information Science and Engineering; School of Computer Science
- 来源：arXiv 2025
- 关键词：Image understanding
- EMRs2CSP: Mining Clinical Status Pathway from Electronic Medical Records被引量：34收藏
- 作者：Chen, Yifei Hou, Ruihui Liu, Jingping Ruan, Tong
- 机构： School of Information Science and Engineering
- 来源：Proceedings of the Annual Meeting of the Association for Computational Linguistics 2025
- 关键词：Data mining - Diagnosis - Electronic health record - Medical computing
- MedOdyssey: A Medical Domain Benchmark for Long Context Evaluation Up to 200K Tokens被引量：34收藏
- 作者：Fan, Yongqi Sun, Hongli Xue, Kui Zhang, Xiaofan Zhang, Shaoting Ruan, Tong
- 机构： School of Information Science and Engineering; Intelligent Healthcare; School of Electronic Information and Electrical Engineering
- 来源：arXiv 2024
- 关键词：Computational linguistics
- FL-Tuning: Layer Tuning for Feed-Forward Network in Transformer被引量：33收藏
- 作者：Liu, Jingping Song, Yuqiu Xue, Kui Sun, Hongli Wang, Chao Chen, Lihan Jiang, Haiyun Liang, Jiaqing Ruan, Tong
- 机构： School of Information Science and Engineering; Shanghai Artificial Intelligence Laboratory; Shanghai Key Laboratory of Data Science; Tencent AI Lab
- 来源：arXiv 2022
- 融入语言模型和注意力机制的临床电子病历命名实体识别被引量：32收藏
- 作者：唐国强 高大启 阮彤 叶琪 王祺
- 机构：华东理工大学信息科学与工程学院
- 来源：《计算机科学》 2020
- 关键词：多头注意力 语言模型 临床医学命名实体识别 深度神经网络 循环控制单元
- 摘要：临床电子病历命名实体识别(Clinical Named Entity Recognition,CNER)的主要任务是对给定的一组电子病历文档进行识别并抽取出与医学临床相关的命名实体,然后将它们归类到预先定义好的类别中,如...
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- DBEE: Dual-Path Biomedical Event Extraction withLarge Language Model被引量：30收藏
- 作者：Zeng, Jianjun Wang, Jiacheng Zhang, Weiyan Wang, Yunpeng Zhou, Yan Wu, Yinan Zhu, Lifeng Ruan, Tong Liu, Jingping
- 机构： School of Information Science and Engineering; Ruijin Hospital; School of Software Engineering
- 来源：Lecture Notes in Computer Science 2026
- 关键词：Biomedical engineering - Computational linguistics - Large datasets - Tuning
- Representation learning for clinical time series prediction tasks in electronic health records被引量：29收藏
- 作者：Ruan, Tong Lei, Liqi Zhou, Yangming Zhai, Jie Zhang, Le He, Ping Gao, Ju
- 机构：East China Univ Sci & Technol;Shanghai Hosp Dev Ctr;Shanghai Univ Tradit Chinese Med
- 来源：BMC MEDICAL INFORMATICS AND DECISION MAKING 2019
- 关键词：Electronic health records Mortality prediction Representation learning Recurrent neural network
- PToco: Prefix-based Token-level Collaboration Enhances Reasoning for Multi-LLMs被引量：28收藏
- 作者：Bian, Yuang Lin, Yupian Liu, Jingping Ruan, Tong
- 机构： School of Information Science and Engineering
- 来源：Proceedings - International Conference on Computational Linguistics, COLING 2025
- 关键词：Multi agent systems - Natural language processing systems
- IMQC: A Large Language Model Platform for Medical Quality Control被引量：26收藏
- 作者：Ye, Qi Yu, Guangya Liu, Jingping Chen, Erzhen Dong, Chenjie Lin, Xiaosheng Liu, Zelei Yu, Han Ruan, Tong
- 机构： School of Information Science and Technology; Shanghai Medical Quality Control Management Center; Xinhong Community Health Service Center; Unicom Industrial Internet Co.; College of Computing and Data Science
- 来源：Proceedings of the AAAI Conference on Artificial Intelligence 2025
- 关键词：Biomedical engineering - Damage detection - Electronic health record - Model predictive control - Patient treatment
- Question answering based clinical text structuring using pre-trained language model被引量：26收藏
- 作者：Qiu, Jiahui Zhou, Yangming Ma, Zhiyuan Ruan, Tong Liu, Jinlin Sun, Jing
- 机构： School of Information Science and Engineering; Ruijin Hospital
- 来源：arXiv 2019
- 关键词：Computational linguistics - Natural language processing systems
- Unexpected Phenomenon: LLMs' Spurious Associations in Information Extraction被引量：26收藏
- 作者：Zhang, Weiyan Lu, Wanpeng Wang, Jiacheng Wang, Yating Chen, Lihan Jiang, Haiyun Liu, Jingping Ruan, Tong
- 机构： School of Information Science and Engineering; Beijing Institute of Control Engineering; Tencent AI Lab
- 来源：Proceedings of the Annual Meeting of the Association for Computational Linguistics 2024
- 关键词：Computational linguistics - Information retrieval - Natural language processing systems - Nonbibliographic retrieval systems - Semantics
- RRNorm: A Novel Framework for Chinese Disease Diagnoses Normalization via LLM-Driven Terminology Component Recognition and Reconstruction被引量：25收藏
- 作者：Fan, Yongqi Zhu, Yansha Xue, Kui Liu, Jingping Ruan, Tong
- 机构： School of Information Science and Engineering; Shanghai Artificial Intelligence Laboratory
- 来源：Proceedings of the Annual Meeting of the Association for Computational Linguistics 2024
- 关键词：Contrastive Learning - Diagnosis - Diseases - Terminology
- On evaluating web-scale extracted knowledge bases in a comparative way被引量：25收藏
- 作者：Ruan, Tong Zhao, Liang Li, Yang Wang, Haofen Dong, Xu
- 机构： Department of Computer Science and Engineering; Department of Computer Science and Engineering; Department of Computer Science and Engineering; Department of Computer Science and Engineering; Department of Computer Science and Engineering
- 来源：International Journal on Semantic Web and Information Systems 2018
- 关键词：Linked data - Open Data
